Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm11599-201ENSMUST00000118720 878 ntBASIC20.55■□□□□ 0.88
Cxcl13O55038 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.55■□□□□ 0.88
Cxcl13O55038 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl13O55038 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cxcl13O55038 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.53■□□□□ 0.88
Cxcl13O55038 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cxcl13O55038 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
Cxcl13O55038 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl13O55038 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl13O55038 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl13O55038 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cxcl13O55038 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl13O55038 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cxcl13O55038 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcl13O55038 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcl13O55038 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcl13O55038 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cxcl13O55038 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl13O55038 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl13O55038 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl13O55038 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cxcl13O55038 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cxcl13O55038 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.47■□□□□ 0.87
Cxcl13O55038 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cxcl13O55038 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.46■□□□□ 0.87
Cxcl13O55038 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cxcl13O55038 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cxcl13O55038 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cxcl13O55038 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.45■□□□□ 0.86
Cxcl13O55038 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl13O55038 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl13O55038 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cxcl13O55038 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.43■□□□□ 0.86
Cxcl13O55038 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl13O55038 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl13O55038 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.43■□□□□ 0.86
Cxcl13O55038 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cxcl13O55038 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Cxcl13O55038 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cxcl13O55038 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cxcl13O55038 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cxcl13O55038 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.38■□□□□ 0.85
Cxcl13O55038 Particl-201ENSMUST00000205370 1560 ntBASIC20.38■□□□□ 0.85
Cxcl13O55038 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl13O55038 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cxcl13O55038 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cxcl13O55038 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcl13O55038 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cxcl13O55038 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.34■□□□□ 0.85
Cxcl13O55038 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl13O55038 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cxcl13O55038 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cxcl13O55038 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cxcl13O55038 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.32■□□□□ 0.84
Cxcl13O55038 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cxcl13O55038 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cxcl13O55038 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Cxcl13O55038 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cxcl13O55038 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cxcl13O55038 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cxcl13O55038 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cxcl13O55038 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.3■□□□□ 0.84
Cxcl13O55038 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.3■□□□□ 0.84
Cxcl13O55038 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cxcl13O55038 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl13O55038 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cxcl13O55038 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Cxcl13O55038 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.28■□□□□ 0.84
Cxcl13O55038 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcl13O55038 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.27■□□□□ 0.84
Cxcl13O55038 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cxcl13O55038 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.27■□□□□ 0.84
Cxcl13O55038 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cxcl13O55038 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl13O55038 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl13O55038 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl13O55038 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cxcl13O55038 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Cxcl13O55038 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.25■□□□□ 0.83
Cxcl13O55038 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.24■□□□□ 0.83
Cxcl13O55038 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcl13O55038 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cxcl13O55038 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cxcl13O55038 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cxcl13O55038 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.23■□□□□ 0.83
Cxcl13O55038 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cxcl13O55038 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcl13O55038 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcl13O55038 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcl13O55038 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cxcl13O55038 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.22■□□□□ 0.83
Cxcl13O55038 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.21■□□□□ 0.83
Cxcl13O55038 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cxcl13O55038 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cxcl13O55038 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cxcl13O55038 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cxcl13O55038 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cxcl13O55038 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cxcl13O55038 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
Cxcl13O55038 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 177 ms