Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
AlyrefO08583 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
AlyrefO08583 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
AlyrefO08583 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.41■■□□□ 1.5
AlyrefO08583 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.41■■□□□ 1.5
AlyrefO08583 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
AlyrefO08583 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
AlyrefO08583 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
AlyrefO08583 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
AlyrefO08583 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
AlyrefO08583 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
AlyrefO08583 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
AlyrefO08583 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
AlyrefO08583 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.38■■□□□ 1.49
AlyrefO08583 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.37■■□□□ 1.49
AlyrefO08583 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
AlyrefO08583 Gm27502-201ENSMUST00000183495 199 ntBASIC24.37■■□□□ 1.49
AlyrefO08583 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
AlyrefO08583 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.35■■□□□ 1.49
AlyrefO08583 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
AlyrefO08583 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
AlyrefO08583 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.33■■□□□ 1.49
AlyrefO08583 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
AlyrefO08583 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.32■■□□□ 1.48
AlyrefO08583 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
AlyrefO08583 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
AlyrefO08583 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
AlyrefO08583 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.3■■□□□ 1.48
AlyrefO08583 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.29■■□□□ 1.48
AlyrefO08583 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
AlyrefO08583 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
AlyrefO08583 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
AlyrefO08583 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.28■■□□□ 1.48
AlyrefO08583 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.27■■□□□ 1.48
AlyrefO08583 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
AlyrefO08583 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.26■■□□□ 1.47
AlyrefO08583 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.26■■□□□ 1.47
AlyrefO08583 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
AlyrefO08583 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
AlyrefO08583 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
AlyrefO08583 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
AlyrefO08583 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.25■■□□□ 1.47
AlyrefO08583 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
AlyrefO08583 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.23■■□□□ 1.47
AlyrefO08583 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
AlyrefO08583 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.22■■□□□ 1.47
AlyrefO08583 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
AlyrefO08583 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
AlyrefO08583 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.21■■□□□ 1.47
AlyrefO08583 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
AlyrefO08583 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
AlyrefO08583 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
AlyrefO08583 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
AlyrefO08583 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
AlyrefO08583 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
AlyrefO08583 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
AlyrefO08583 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.18■■□□□ 1.46
AlyrefO08583 Rps24-207ENSMUST00000224568 714 ntBASIC24.18■■□□□ 1.46
AlyrefO08583 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
AlyrefO08583 Gm5921-201ENSMUST00000075898 882 ntBASIC24.18■■□□□ 1.46
AlyrefO08583 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
AlyrefO08583 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.17■■□□□ 1.46
AlyrefO08583 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.17■■□□□ 1.46
AlyrefO08583 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
AlyrefO08583 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
AlyrefO08583 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.16■■□□□ 1.46
AlyrefO08583 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
AlyrefO08583 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
AlyrefO08583 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.15■■□□□ 1.46
AlyrefO08583 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
AlyrefO08583 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
AlyrefO08583 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
AlyrefO08583 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
AlyrefO08583 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
AlyrefO08583 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
AlyrefO08583 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.11■■□□□ 1.45
AlyrefO08583 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
AlyrefO08583 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
AlyrefO08583 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
AlyrefO08583 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
AlyrefO08583 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
AlyrefO08583 Gm14523-201ENSMUST00000117260 558 ntBASIC24.07■■□□□ 1.44
AlyrefO08583 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
AlyrefO08583 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
AlyrefO08583 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
AlyrefO08583 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.05■■□□□ 1.44
AlyrefO08583 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
AlyrefO08583 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
AlyrefO08583 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
AlyrefO08583 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
AlyrefO08583 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
AlyrefO08583 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.04■■□□□ 1.44
AlyrefO08583 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
AlyrefO08583 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
AlyrefO08583 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
AlyrefO08583 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24.03■■□□□ 1.44
AlyrefO08583 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
AlyrefO08583 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
AlyrefO08583 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
AlyrefO08583 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms