Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Rfpl4bJ3QPR6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
Rfpl4bJ3QPR6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
Rfpl4bJ3QPR6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.97■■■□□ 2.07
Rfpl4bJ3QPR6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Rfpl4bJ3QPR6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Rfpl4bJ3QPR6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rfpl4bJ3QPR6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Rfpl4bJ3QPR6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Rfpl4bJ3QPR6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rfpl4bJ3QPR6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rfpl4bJ3QPR6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.93■■■□□ 2.06
Rfpl4bJ3QPR6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
Rfpl4bJ3QPR6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rfpl4bJ3QPR6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Rfpl4bJ3QPR6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC27.92■■■□□ 2.06
Rfpl4bJ3QPR6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rfpl4bJ3QPR6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
Rfpl4bJ3QPR6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
Rfpl4bJ3QPR6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC27.9■■■□□ 2.06
Rfpl4bJ3QPR6 Zxda-201ENSMUST00000117281 2621 ntBASIC27.89■■■□□ 2.06
Rfpl4bJ3QPR6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
Rfpl4bJ3QPR6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
Rfpl4bJ3QPR6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Rfpl4bJ3QPR6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Rfpl4bJ3QPR6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rfpl4bJ3QPR6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rfpl4bJ3QPR6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.84■■■□□ 2.05
Rfpl4bJ3QPR6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC27.84■■■□□ 2.05
Rfpl4bJ3QPR6 Particl-201ENSMUST00000205370 1560 ntBASIC27.84■■■□□ 2.05
Rfpl4bJ3QPR6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.83■■■□□ 2.05
Rfpl4bJ3QPR6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC27.82■■■□□ 2.04
Rfpl4bJ3QPR6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rfpl4bJ3QPR6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Rfpl4bJ3QPR6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rfpl4bJ3QPR6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rfpl4bJ3QPR6 Gm30023-201ENSMUST00000197970 889 ntBASIC27.8■■■□□ 2.04
Rfpl4bJ3QPR6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rfpl4bJ3QPR6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rfpl4bJ3QPR6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Rfpl4bJ3QPR6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Rfpl4bJ3QPR6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Rfpl4bJ3QPR6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
Rfpl4bJ3QPR6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Rfpl4bJ3QPR6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Rfpl4bJ3QPR6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Rfpl4bJ3QPR6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rfpl4bJ3QPR6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Rfpl4bJ3QPR6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Rfpl4bJ3QPR6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Rfpl4bJ3QPR6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Rfpl4bJ3QPR6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rfpl4bJ3QPR6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rfpl4bJ3QPR6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC27.73■■■□□ 2.03
Rfpl4bJ3QPR6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC27.73■■■□□ 2.03
Rfpl4bJ3QPR6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
Rfpl4bJ3QPR6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.73■■■□□ 2.03
Rfpl4bJ3QPR6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Rfpl4bJ3QPR6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Rfpl4bJ3QPR6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rfpl4bJ3QPR6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rfpl4bJ3QPR6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rfpl4bJ3QPR6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Rfpl4bJ3QPR6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Rfpl4bJ3QPR6 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.7■■■□□ 2.03
Rfpl4bJ3QPR6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Rfpl4bJ3QPR6 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.69■■■□□ 2.02
Rfpl4bJ3QPR6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
Rfpl4bJ3QPR6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Rfpl4bJ3QPR6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
Rfpl4bJ3QPR6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rfpl4bJ3QPR6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rfpl4bJ3QPR6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Rfpl4bJ3QPR6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rfpl4bJ3QPR6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Rfpl4bJ3QPR6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Rfpl4bJ3QPR6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.65■■■□□ 2.02
Rfpl4bJ3QPR6 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.65■■■□□ 2.02
Rfpl4bJ3QPR6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Rfpl4bJ3QPR6 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.64■■■□□ 2.02
Rfpl4bJ3QPR6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
Rfpl4bJ3QPR6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
Rfpl4bJ3QPR6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
Rfpl4bJ3QPR6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Rfpl4bJ3QPR6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rfpl4bJ3QPR6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Rfpl4bJ3QPR6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Rfpl4bJ3QPR6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
Rfpl4bJ3QPR6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Rfpl4bJ3QPR6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
Rfpl4bJ3QPR6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.59■■■□□ 2.01
Rfpl4bJ3QPR6 Scarna2-201ENSMUST00000157560 414 ntBASIC27.59■■■□□ 2.01
Rfpl4bJ3QPR6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rfpl4bJ3QPR6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Rfpl4bJ3QPR6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rfpl4bJ3QPR6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rfpl4bJ3QPR6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.57■■■□□ 2
Rfpl4bJ3QPR6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.57■■■□□ 2
Rfpl4bJ3QPR6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rfpl4bJ3QPR6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.56■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 139.4 ms