Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shank1D3YZU1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shank1D3YZU1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.76■■□□□ 1.07
Shank1D3YZU1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Shank1D3YZU1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank1D3YZU1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank1D3YZU1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shank1D3YZU1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shank1D3YZU1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shank1D3YZU1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shank1D3YZU1 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.72■■□□□ 1.07
Shank1D3YZU1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank1D3YZU1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank1D3YZU1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank1D3YZU1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shank1D3YZU1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shank1D3YZU1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shank1D3YZU1 Particl-201ENSMUST00000205370 1560 ntBASIC21.7■■□□□ 1.06
Shank1D3YZU1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.7■■□□□ 1.06
Shank1D3YZU1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Shank1D3YZU1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shank1D3YZU1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shank1D3YZU1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shank1D3YZU1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shank1D3YZU1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank1D3YZU1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank1D3YZU1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank1D3YZU1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shank1D3YZU1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shank1D3YZU1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shank1D3YZU1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shank1D3YZU1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shank1D3YZU1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.66■■□□□ 1.06
Shank1D3YZU1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Shank1D3YZU1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Shank1D3YZU1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.64■■□□□ 1.06
Shank1D3YZU1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Shank1D3YZU1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
Shank1D3YZU1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shank1D3YZU1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.63■■□□□ 1.05
Shank1D3YZU1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shank1D3YZU1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shank1D3YZU1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shank1D3YZU1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Shank1D3YZU1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Shank1D3YZU1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.59■■□□□ 1.05
Shank1D3YZU1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shank1D3YZU1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Shank1D3YZU1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.58■■□□□ 1.04
Shank1D3YZU1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Shank1D3YZU1 Gm30023-201ENSMUST00000197970 889 ntBASIC21.58■■□□□ 1.04
Shank1D3YZU1 Gm4799-201ENSMUST00000095396 657 ntBASIC21.58■■□□□ 1.04
Shank1D3YZU1 Scarna2-201ENSMUST00000157560 414 ntBASIC21.57■■□□□ 1.04
Shank1D3YZU1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Shank1D3YZU1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Shank1D3YZU1 Gm11687-201ENSMUST00000118911 886 ntBASIC21.57■■□□□ 1.04
Shank1D3YZU1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.57■■□□□ 1.04
Shank1D3YZU1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Shank1D3YZU1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Shank1D3YZU1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.54■■□□□ 1.04
Shank1D3YZU1 Gm9806-201ENSMUST00000051080 552 ntBASIC21.54■■□□□ 1.04
Shank1D3YZU1 Gm16437-201ENSMUST00000025669 507 ntBASIC21.54■■□□□ 1.04
Shank1D3YZU1 Gm7332-201ENSMUST00000118351 454 ntBASIC21.53■■□□□ 1.04
Shank1D3YZU1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.53■■□□□ 1.04
Shank1D3YZU1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.53■■□□□ 1.04
Shank1D3YZU1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shank1D3YZU1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Shank1D3YZU1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shank1D3YZU1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Shank1D3YZU1 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.51■■□□□ 1.03
Shank1D3YZU1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shank1D3YZU1 Gm45364-201ENSMUST00000210883 159 ntBASIC21.5■■□□□ 1.03
Shank1D3YZU1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shank1D3YZU1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.49■■□□□ 1.03
Shank1D3YZU1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.49■■□□□ 1.03
Shank1D3YZU1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shank1D3YZU1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shank1D3YZU1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shank1D3YZU1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shank1D3YZU1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shank1D3YZU1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shank1D3YZU1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shank1D3YZU1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shank1D3YZU1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shank1D3YZU1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shank1D3YZU1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
Shank1D3YZU1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Shank1D3YZU1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shank1D3YZU1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Shank1D3YZU1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shank1D3YZU1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shank1D3YZU1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shank1D3YZU1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shank1D3YZU1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Shank1D3YZU1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Shank1D3YZU1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.43■■□□□ 1.02
Shank1D3YZU1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shank1D3YZU1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shank1D3YZU1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shank1D3YZU1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms