Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chd6A3KFM7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Chd6A3KFM7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Chd6A3KFM7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chd6A3KFM7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Chd6A3KFM7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.39■□□□□ 0.85
Chd6A3KFM7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd6A3KFM7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Chd6A3KFM7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chd6A3KFM7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.37■□□□□ 0.85
Chd6A3KFM7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.37■□□□□ 0.85
Chd6A3KFM7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd6A3KFM7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd6A3KFM7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.37■□□□□ 0.85
Chd6A3KFM7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chd6A3KFM7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chd6A3KFM7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Chd6A3KFM7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd6A3KFM7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd6A3KFM7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd6A3KFM7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd6A3KFM7 Gm14523-201ENSMUST00000117260 558 ntBASIC20.32■□□□□ 0.84
Chd6A3KFM7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd6A3KFM7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Chd6A3KFM7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd6A3KFM7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.3■□□□□ 0.84
Chd6A3KFM7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd6A3KFM7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd6A3KFM7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.3■□□□□ 0.84
Chd6A3KFM7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd6A3KFM7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Chd6A3KFM7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd6A3KFM7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd6A3KFM7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.28■□□□□ 0.84
Chd6A3KFM7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd6A3KFM7 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.27■□□□□ 0.84
Chd6A3KFM7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Chd6A3KFM7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd6A3KFM7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd6A3KFM7 Rps24-207ENSMUST00000224568 714 ntBASIC20.26■□□□□ 0.83
Chd6A3KFM7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd6A3KFM7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd6A3KFM7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd6A3KFM7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.25■□□□□ 0.83
Chd6A3KFM7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd6A3KFM7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chd6A3KFM7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.25■□□□□ 0.83
Chd6A3KFM7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.25■□□□□ 0.83
Chd6A3KFM7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chd6A3KFM7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Chd6A3KFM7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd6A3KFM7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd6A3KFM7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Chd6A3KFM7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.22■□□□□ 0.83
Chd6A3KFM7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.22■□□□□ 0.83
Chd6A3KFM7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd6A3KFM7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.21■□□□□ 0.83
Chd6A3KFM7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Chd6A3KFM7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd6A3KFM7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Chd6A3KFM7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Chd6A3KFM7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd6A3KFM7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd6A3KFM7 Gm27502-201ENSMUST00000183495 199 ntBASIC20.19■□□□□ 0.82
Chd6A3KFM7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chd6A3KFM7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Chd6A3KFM7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Chd6A3KFM7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd6A3KFM7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.18■□□□□ 0.82
Chd6A3KFM7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd6A3KFM7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd6A3KFM7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd6A3KFM7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd6A3KFM7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd6A3KFM7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.16■□□□□ 0.82
Chd6A3KFM7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd6A3KFM7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd6A3KFM7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd6A3KFM7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd6A3KFM7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.15■□□□□ 0.82
Chd6A3KFM7 Gm10420-201ENSMUST00000121713 882 ntBASIC20.15■□□□□ 0.82
Chd6A3KFM7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Chd6A3KFM7 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.14■□□□□ 0.81
Chd6A3KFM7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd6A3KFM7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.13■□□□□ 0.81
Chd6A3KFM7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd6A3KFM7 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.11■□□□□ 0.81
Chd6A3KFM7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd6A3KFM7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd6A3KFM7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.1■□□□□ 0.81
Chd6A3KFM7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd6A3KFM7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd6A3KFM7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chd6A3KFM7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd6A3KFM7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd6A3KFM7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd6A3KFM7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Chd6A3KFM7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd6A3KFM7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd6A3KFM7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 341 ms