Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv1-88A0A140T8N1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv1-88A0A140T8N1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Igkv1-88A0A140T8N1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Igkv1-88A0A140T8N1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Igkv1-88A0A140T8N1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.63■□□□□ 0.09
Igkv1-88A0A140T8N1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Igkv1-88A0A140T8N1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Igkv1-88A0A140T8N1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv1-88A0A140T8N1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv1-88A0A140T8N1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Igkv1-88A0A140T8N1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Igkv1-88A0A140T8N1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Igkv1-88A0A140T8N1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Igkv1-88A0A140T8N1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv1-88A0A140T8N1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv1-88A0A140T8N1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Igkv1-88A0A140T8N1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Igkv1-88A0A140T8N1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv1-88A0A140T8N1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv1-88A0A140T8N1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Igkv1-88A0A140T8N1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Igkv1-88A0A140T8N1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Igkv1-88A0A140T8N1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv1-88A0A140T8N1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv1-88A0A140T8N1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Igkv1-88A0A140T8N1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Igkv1-88A0A140T8N1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv1-88A0A140T8N1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Igkv1-88A0A140T8N1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv1-88A0A140T8N1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Igkv1-88A0A140T8N1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Igkv1-88A0A140T8N1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Igkv1-88A0A140T8N1 Gm16148-201ENSMUST00000119653 893 ntBASIC15.56■□□□□ 0.08
Igkv1-88A0A140T8N1 Gm24804-201ENSMUST00000174982 85 ntBASIC15.56■□□□□ 0.08
Igkv1-88A0A140T8N1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv1-88A0A140T8N1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Igkv1-88A0A140T8N1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Igkv1-88A0A140T8N1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Igkv1-88A0A140T8N1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv1-88A0A140T8N1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv1-88A0A140T8N1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv1-88A0A140T8N1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Igkv1-88A0A140T8N1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Igkv1-88A0A140T8N1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Igkv1-88A0A140T8N1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv1-88A0A140T8N1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Igkv1-88A0A140T8N1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Igkv1-88A0A140T8N1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Igkv1-88A0A140T8N1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Igkv1-88A0A140T8N1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv1-88A0A140T8N1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv1-88A0A140T8N1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv1-88A0A140T8N1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
Igkv1-88A0A140T8N1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv1-88A0A140T8N1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv1-88A0A140T8N1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Igkv1-88A0A140T8N1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Igkv1-88A0A140T8N1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Igkv1-88A0A140T8N1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv1-88A0A140T8N1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Igkv1-88A0A140T8N1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.48■□□□□ 0.07
Igkv1-88A0A140T8N1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv1-88A0A140T8N1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv1-88A0A140T8N1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv1-88A0A140T8N1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Igkv1-88A0A140T8N1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv1-88A0A140T8N1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Igkv1-88A0A140T8N1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv1-88A0A140T8N1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.47■□□□□ 0.07
Igkv1-88A0A140T8N1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Igkv1-88A0A140T8N1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Igkv1-88A0A140T8N1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms