Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv12-2A0A0B4J1H1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trbv12-2A0A0B4J1H1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv12-2A0A0B4J1H1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv12-2A0A0B4J1H1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trbv12-2A0A0B4J1H1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.83■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv12-2A0A0B4J1H1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv12-2A0A0B4J1H1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv12-2A0A0B4J1H1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv12-2A0A0B4J1H1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.77■□□□□ 0.6
Trbv12-2A0A0B4J1H1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv12-2A0A0B4J1H1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.73■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trbv12-2A0A0B4J1H1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trbv12-2A0A0B4J1H1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Trbv12-2A0A0B4J1H1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.7■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trbv12-2A0A0B4J1H1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.66■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Trbv12-2A0A0B4J1H1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms