Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Gm30023-201ENSMUST00000197970 889 ntBASIC22.44■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.44■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.43■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.41■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Gm11599-201ENSMUST00000118720 878 ntBASIC22.4■■□□□ 1.18
Ighv1-43A0A0A6YXN5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.38■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv1-43A0A0A6YXN5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ighv1-43A0A0A6YXN5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.36■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.35■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.34■■□□□ 1.17
Ighv1-43A0A0A6YXN5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.34■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.34■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ighv1-43A0A0A6YXN5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ighv1-43A0A0A6YXN5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-43A0A0A6YXN5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ighv1-43A0A0A6YXN5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ighv1-43A0A0A6YXN5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ighv1-43A0A0A6YXN5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.3■■□□□ 1.16
Ighv1-43A0A0A6YXN5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ighv1-43A0A0A6YXN5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-43A0A0A6YXN5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ighv1-43A0A0A6YXN5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.24■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Particl-201ENSMUST00000205370 1560 ntBASIC22.24■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv1-43A0A0A6YXN5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ighv1-43A0A0A6YXN5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.18■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.17■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.16■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ighv1-43A0A0A6YXN5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.14■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.13■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-43A0A0A6YXN5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.11■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.1■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ighv1-43A0A0A6YXN5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ighv1-43A0A0A6YXN5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.08■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv1-43A0A0A6YXN5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.07■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.06■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ighv1-43A0A0A6YXN5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.01■■□□□ 1.11
Ighv1-43A0A0A6YXN5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.01■■□□□ 1.11
Ighv1-43A0A0A6YXN5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms