Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm33952-201ENSMUST00000197795 408 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm42542-201ENSMUST00000197978 268 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm45209-201ENSMUST00000207122 353 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm45236-201ENSMUST00000208632 229 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Mir99a-201ENSMUST00000083596 65 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm650-201ENSMUST00000144428 1551 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm8935-202ENSMUST00000105727 1959 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.69□□□□□ -1.66
Trim39Q9ESN2 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm43283-201ENSMUST00000199138 2548 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Mir676-201ENSMUST00000102443 89 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm13457-201ENSMUST00000117885 267 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm12901-201ENSMUST00000118690 532 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm14871-201ENSMUST00000119056 194 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm12417-201ENSMUST00000119153 403 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm11718-201ENSMUST00000119942 537 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm13729-201ENSMUST00000120328 406 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm17014-201ENSMUST00000120765 168 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Mir5129-201ENSMUST00000174938 78 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm25450-201ENSMUST00000179144 107 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Mir7687-201ENSMUST00000184722 59 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Mir7674-201ENSMUST00000184964 63 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm5285-201ENSMUST00000193089 666 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm37882-201ENSMUST00000195254 196 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm43583-201ENSMUST00000199235 303 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm18011-201ENSMUST00000203717 565 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm45002-201ENSMUST00000208045 120 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm44648-201ENSMUST00000208267 329 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm45513-201ENSMUST00000210228 376 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Trim39Q9ESN2 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm24429-201ENSMUST00000104076 132 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Mir466j-201ENSMUST00000116876 122 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm15058-201ENSMUST00000117689 458 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm12722-201ENSMUST00000118507 493 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm16032-201ENSMUST00000118534 168 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm14521-201ENSMUST00000119545 350 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm11481-201ENSMUST00000120069 255 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm22958-201ENSMUST00000122512 184 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm25637-201ENSMUST00000157529 107 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm26169-201ENSMUST00000158420 135 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm10784-201ENSMUST00000178715 238 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm28623-201ENSMUST00000187219 192 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm37089-201ENSMUST00000195616 129 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm43554-201ENSMUST00000199987 186 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm44208-201ENSMUST00000205199 421 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm18468-201ENSMUST00000207321 369 ntBASIC4.67□□□□□ -1.66
Trim39Q9ESN2 Gm18465-201ENSMUST00000207468 369 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms