Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 XKRY2-202ENST00000623874 1581 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 XKRY-202ENST00000624960 1581 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 RN7SKP1-201ENST00000365525 307 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC010878.1-201ENST00000456500 1047 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AL928654.1-201ENST00000476081 354 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 OR9L1P-201ENST00000529493 933 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC005070.2-201ENST00000604391 260 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC012640.3-201ENST00000607847 430 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AL354950.1-201ENST00000614150 568 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC006213.4-201ENST00000616184 634 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 AL034408.1-201ENST00000637712 664 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 CDY19P-201ENST00000411668 1613 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 CDY18P-201ENST00000438294 1609 ntBASIC7.22□□□□□ -1.25
RFX6Q8HWS3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
RFX6Q8HWS3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.21□□□□□ -1.25
RFX6Q8HWS3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.25
RFX6Q8HWS3 AP002800.1-201ENST00000624982 2225 ntBASIC7.21□□□□□ -1.25
RFX6Q8HWS3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.21□□□□□ -1.25
RFX6Q8HWS3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
RFX6Q8HWS3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.21□□□□□ -1.25
RFX6Q8HWS3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
RFX6Q8HWS3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RFX6Q8HWS3 AC087392.3-202ENST00000358446 1754 ntBASIC7.21□□□□□ -1.25
RFX6Q8HWS3 PWRN1-212ENST00000569908 1435 ntBASIC7.21□□□□□ -1.25
RFX6Q8HWS3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 MAPK10-323ENST00000641493 3207 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 RN7SKP55-201ENST00000364888 307 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 U3.14-201ENST00000365363 227 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC226101.1-201ENST00000401483 387 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 RN7SKP148-201ENST00000410179 275 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 CHCHD3P1-201ENST00000425516 676 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC134879.1-201ENST00000426062 394 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 RN7SL563P-201ENST00000481233 298 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 OR5M6P-201ENST00000530227 937 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC104117.5-201ENST00000606195 547 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AL031777.2-201ENST00000611953 196 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 RN7SL126P-201ENST00000616400 299 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AL356585.10-201ENST00000641883 123 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC129502.1-201ENST00000623261 1654 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 AC110597.1-201ENST00000562669 3176 ntBASIC7.21□□□□□ -1.26
RFX6Q8HWS3 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
RFX6Q8HWS3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RFX6Q8HWS3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RFX6Q8HWS3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms