Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 PHBP4-201ENST00000437447 837 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 AP002345.1-201ENST00000456493 928 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC6.61□□□□□ -1.35
SUMO3P55854 HMGB1P47-201ENST00000511281 589 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 PSMC1P8-201ENST00000536820 1296 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 PRR13P5-201ENST00000596581 442 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 AC005776.1-201ENST00000603164 290 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 AC027271.1-201ENST00000610270 610 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 uc_338.37-201ENST00000620113 186 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 BX005040.2-201ENST00000620504 370 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.61□□□□□ -1.35
SUMO3P55854 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 AL132656.3-201ENST00000606384 1595 ntBASIC6.61□□□□□ -1.35
SUMO3P55854 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SUMO3P55854 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
SUMO3P55854 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.61□□□□□ -1.35
SUMO3P55854 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC6.6□□□□□ -1.35
SUMO3P55854 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 AP003175.1-201ENST00000641383 6658 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 TMEM75-201ENST00000624314 2165 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 SNORD115-48-201ENST00000364764 76 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SUMO3P55854 RNU2-5P-201ENST00000410533 180 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 RN7SKP236-201ENST00000410635 284 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.6□□□□□ -1.35
SUMO3P55854 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 UQCRHP1-204ENST00000424609 274 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AF274573.1-201ENST00000430535 494 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 MED28P4-201ENST00000433137 572 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 Z99127.2-201ENST00000441426 334 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 STRADBP1-201ENST00000478954 1281 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.6□□□□□ -1.35
SUMO3P55854 RN7SL775P-201ENST00000498361 336 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.6□□□□□ -1.35
SUMO3P55854 AK4P6-201ENST00000505168 528 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC093763.2-201ENST00000505334 1223 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 ENPP7P3-201ENST00000509123 241 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC146944.3-201ENST00000509969 371 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 LINC01085-203ENST00000511195 326 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.6□□□□□ -1.35
SUMO3P55854 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.6□□□□□ -1.35
SUMO3P55854 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SUMO3P55854 AL161747.2-201ENST00000535893 472 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.6□□□□□ -1.35
SUMO3P55854 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 OR4N3P-201ENST00000559395 818 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC079148.1-201ENST00000565944 819 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.6□□□□□ -1.35
SUMO3P55854 MIR3135A-201ENST00000578460 77 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
SUMO3P55854 RPSAP66-201ENST00000592196 606 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC006116.6-201ENST00000593258 1103 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC6.6□□□□□ -1.35
SUMO3P55854 AP003117.1-201ENST00000602771 554 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC137695.2-201ENST00000603123 754 ntBASIC6.6□□□□□ -1.35
SUMO3P55854 AC135178.6-201ENST00000605314 398 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms