Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC107980.1-201ENST00000558671 3355 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC009237.3-203ENST00000442128 3551 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 OR7E25P-201ENST00000344844 931 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 RPL12P43-201ENST00000420608 499 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 YY1P1-201ENST00000427625 668 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 NPM1P21-201ENST00000513394 762 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 RNU6-751P-201ENST00000516382 101 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 Vault.2-201ENST00000516519 98 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 DPPA3P2-201ENST00000553589 478 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 NDUFA3P4-201ENST00000560814 250 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC243312.1-201ENST00000570582 275 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 RN7SL778P-201ENST00000607160 297 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC078909.2-201ENST00000620584 398 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC211433.3-201ENST00000623770 375 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC137056.2-201ENST00000624055 1958 ntBASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LINC00346Q8IVM7 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 TPTE2P2-201ENST00000403471 1466 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 CR382285.2-201ENST00000624662 1495 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RNA5SP472-201ENST00000363868 119 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RN7SKP107-201ENST00000364157 290 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AL589994.1-201ENST00000404962 340 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RN7SKP38-201ENST00000410782 309 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC017104.2-201ENST00000417000 321 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC073900.1-201ENST00000429766 776 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 CYCSP44-201ENST00000448560 313 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RN7SL834P-201ENST00000461450 286 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 TAAR3P-201ENST00000466706 1078 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 TAAR3P-202ENST00000481759 1025 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RN7SL797P-201ENST00000486314 297 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 RPS4XP23-201ENST00000487801 237 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 GAPDHP38-201ENST00000503632 1002 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC138409.2-202ENST00000507274 458 ntBASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.28□□□□□ -1.4
LINC00346Q8IVM7 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms