Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 SNORA70D-201ENST00000578836 135 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AC092266.1-201ENST00000610958 165 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC11.97□□□□□ -0.49
SMARCA4P51532 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC11.97□□□□□ -0.49
SMARCA4P51532 LPAL2-203ENST00000454031 2498 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
SMARCA4P51532 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 AC105046.1-201ENST00000566457 4997 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
SMARCA4P51532 CIR1P2-201ENST00000514821 1342 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SMARCA4P51532 SNORA51.1-201ENST00000363243 140 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AL590762.1-201ENST00000391782 432 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC11.97□□□□□ -0.49
SMARCA4P51532 RPL23AP64-201ENST00000469465 435 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC11.97□□□□□ -0.49
SMARCA4P51532 AC008429.2-201ENST00000523057 864 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AC079905.1-201ENST00000549280 475 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SMARCA4P51532 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC11.97□□□□□ -0.49
SMARCA4P51532 AC100767.2-201ENST00000604840 693 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 AL121583.1-201ENST00000612444 682 ntBASIC11.97□□□□□ -0.49
SMARCA4P51532 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SMARCA4P51532 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
SMARCA4P51532 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC11.96□□□□□ -0.49
SMARCA4P51532 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC11.96□□□□□ -0.49
SMARCA4P51532 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SMARCA4P51532 UBTFL11-201ENST00000428234 2252 ntBASIC11.96□□□□□ -0.49
SMARCA4P51532 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC11.96□□□□□ -0.49
SMARCA4P51532 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SMARCA4P51532 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMARCA4P51532 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
SMARCA4P51532 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMARCA4P51532 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC11.96□□□□□ -0.5
SMARCA4P51532 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMARCA4P51532 COX6B1P3-201ENST00000312310 260 ntBASIC11.96□□□□□ -0.5
SMARCA4P51532 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMARCA4P51532 RPL23AP85-201ENST00000421838 433 ntBASIC11.96□□□□□ -0.5
SMARCA4P51532 AC094019.1-201ENST00000434678 472 ntBASIC11.96□□□□□ -0.5
SMARCA4P51532 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC11.96□□□□□ -0.5
SMARCA4P51532 CRYGGP-201ENST00000443337 145 ntBASIC11.96□□□□□ -0.5
SMARCA4P51532 RN7SL177P-201ENST00000476596 299 ntBASIC11.96□□□□□ -0.5
SMARCA4P51532 FAU-203ENST00000525297 355 ntTSL 5 BASIC11.96□□□□□ -0.5
SMARCA4P51532 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC11.96□□□□□ -0.5
SMARCA4P51532 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC11.96□□□□□ -0.5
SMARCA4P51532 AC026367.2-201ENST00000610630 553 ntBASIC11.96□□□□□ -0.5
SMARCA4P51532 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMARCA4P51532 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC11.96□□□□□ -0.5
SMARCA4P51532 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC11.96□□□□□ -0.5
SMARCA4P51532 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
SMARCA4P51532 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SMARCA4P51532 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SMARCA4P51532 NPL-212ENST00000614468 2376 ntTSL 5 BASIC11.95□□□□□ -0.5
SMARCA4P51532 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SMARCA4P51532 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC11.95□□□□□ -0.5
SMARCA4P51532 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC11.95□□□□□ -0.5
SMARCA4P51532 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SMARCA4P51532 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SMARCA4P51532 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 RNA5SP110-201ENST00000362638 115 ntBASIC11.95□□□□□ -0.5
SMARCA4P51532 BX510359.3-201ENST00000422168 306 ntBASIC11.95□□□□□ -0.5
SMARCA4P51532 LYPLA1P1-201ENST00000434514 622 ntBASIC11.95□□□□□ -0.5
SMARCA4P51532 RPL23AP19-201ENST00000436229 369 ntBASIC11.95□□□□□ -0.5
SMARCA4P51532 RPS14P8-201ENST00000478778 369 ntBASIC11.95□□□□□ -0.5
SMARCA4P51532 RPL5P14-201ENST00000494197 878 ntBASIC11.95□□□□□ -0.5
SMARCA4P51532 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC11.95□□□□□ -0.5
SMARCA4P51532 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC11.95□□□□□ -0.5
SMARCA4P51532 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC11.95□□□□□ -0.5
SMARCA4P51532 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC11.95□□□□□ -0.5
SMARCA4P51532 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC11.95□□□□□ -0.5
SMARCA4P51532 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
SMARCA4P51532 EEF1A1P9-201ENST00000514975 1383 ntBASIC11.95□□□□□ -0.5
SMARCA4P51532 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
SMARCA4P51532 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SMARCA4P51532 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SMARCA4P51532 CYB5R4-202ENST00000369681 9252 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SMARCA4P51532 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms