Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.01□□□□□ -1.93
Scn5aQ9JJV9 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.01□□□□□ -1.93
Scn5aQ9JJV9 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Scn5aQ9JJV9 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Scn5aQ9JJV9 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Scn5aQ9JJV9 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm13419-201ENSMUST00000121711 271 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm14768-201ENSMUST00000122126 678 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm23387-201ENSMUST00000158586 107 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Mir3076-201ENSMUST00000175415 60 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm8649-201ENSMUST00000181799 233 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm34314-201ENSMUST00000203622 367 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 CT025579.1-201ENSMUST00000223779 366 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 AC133517.1-203ENSMUST00000225570 390 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 AC127371.1-202ENSMUST00000228923 306 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Mir465-201ENSMUST00000093563 74 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm22674-201ENSMUST00000104413 131 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm26247-201ENSMUST00000116702 91 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Mir1192-201ENSMUST00000116976 121 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm12889-201ENSMUST00000118684 241 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 DQ267100-201ENSMUST00000122600 72 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm24213-201ENSMUST00000158255 258 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm6374-201ENSMUST00000159051 788 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm24754-201ENSMUST00000177997 107 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm23963-201ENSMUST00000179603 77 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm24969-201ENSMUST00000180331 79 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm18338-201ENSMUST00000222381 560 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm23104-201ENSMUST00000083722 104 ntBASIC3□□□□□ -1.93
Scn5aQ9JJV9 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Scn5aQ9JJV9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm25153-201ENSMUST00000157118 156 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm20660-201ENSMUST00000177515 289 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm43415-201ENSMUST00000201934 750 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 LOC667541-201ENSMUST00000223408 278 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 AC156574.2-201ENSMUST00000228023 282 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.99□□□□□ -1.93
Scn5aQ9JJV9 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm12294-201ENSMUST00000119723 490 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm13555-201ENSMUST00000121668 319 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm17030-201ENSMUST00000167016 393 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm27715-201ENSMUST00000184714 260 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Ighv1-79-201ENSMUST00000200152 350 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm5322-201ENSMUST00000206142 699 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm46194-201ENSMUST00000218136 320 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm25131-201ENSMUST00000082653 151 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Mir21a-201ENSMUST00000083521 92 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm23128-201ENSMUST00000104257 132 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm14301-201ENSMUST00000120181 324 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm28574-201ENSMUST00000185757 699 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm28781-201ENSMUST00000185760 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm29574-201ENSMUST00000186226 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm28057-201ENSMUST00000186603 615 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm29307-201ENSMUST00000187367 696 ntBASIC2.98□□□□□ -1.93
Scn5aQ9JJV9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms