Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RBBP4P1-201ENST00000502424 1276 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 SNORA76.2-201ENST00000517095 137 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC034205.1-201ENST00000520621 638 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 ZKSCAN7P1-201ENST00000543668 673 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC144548.1-201ENST00000549577 324 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC105275.2-201ENST00000567907 711 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC009171.1-201ENST00000572673 266 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC009955.2-201ENST00000597288 542 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 CARSP1-201ENST00000603171 889 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC027334.1-201ENST00000603257 310 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AC096586.2-201ENST00000610260 441 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 RN7SL3-201ENST00000610674 299 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 AL121985.2-201ENST00000621192 555 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AL450226.2-201ENST00000622913 439 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.38□□□□□ -1.23
COL6A2P12110 SNORA43.5-201ENST00000631270 138 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 AL390036.1-203ENST00000635340 894 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 AC069222.1-201ENST00000608028 3360 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL6A2P12110 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.38□□□□□ -1.23
COL6A2P12110 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.38□□□□□ -1.23
COL6A2P12110 CCDC162P-202ENST00000368966 6751 ntBASIC7.38□□□□□ -1.23
COL6A2P12110 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL6A2P12110 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL6A2P12110 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 WNK1-220ENST00000574564 1401 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 AP003471.1-202ENST00000319051 1988 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 COQ10B-202ENST00000409010 1355 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 PSMC1P6-201ENST00000477233 1319 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 RNA5SP71-201ENST00000362967 126 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 RN7SKP174-201ENST00000363803 330 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC7.37□□□□□ -1.23
COL6A2P12110 MORN2-202ENST00000409077 465 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL6A2P12110 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC092570.3-201ENST00000420113 693 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 KRT18P53-201ENST00000431919 117 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 MORF4L1P5-201ENST00000433352 961 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 AC009237.1-201ENST00000442127 744 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 ELOCP13-201ENST00000443934 329 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 LIN28AP2-201ENST00000445283 458 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 DEFA11P-201ENST00000446470 261 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.37□□□□□ -1.23
COL6A2P12110 GAPDHP16-201ENST00000448152 962 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 RPS26P41-201ENST00000450370 284 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC7.37□□□□□ -1.23
COL6A2P12110 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC7.37□□□□□ -1.23
COL6A2P12110 snoU109.3-201ENST00000459477 145 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC009153.1-201ENST00000485799 496 ntBASIC7.37□□□□□ -1.23
COL6A2P12110 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms