Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm44010-201ENSMUST00000204432 331 ntBASIC5.21□□□□□ -1.58
Msx1P13297 AC165293.1-201ENSMUST00000219669 329 ntBASIC5.21□□□□□ -1.58
Msx1P13297 AC121942.2-201ENSMUST00000223824 600 ntBASIC5.21□□□□□ -1.58
Msx1P13297 AC122320.1-201ENSMUST00000227233 105 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Gm26457-201ENSMUST00000082678 78 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm25813-201ENSMUST00000082748 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm24950-201ENSMUST00000082768 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm23932-201ENSMUST00000082914 107 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm23444-201ENSMUST00000082922 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm23971-201ENSMUST00000083317 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Mir302d-201ENSMUST00000083513 66 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm23849-201ENSMUST00000083833 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm26316-201ENSMUST00000083886 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm25187-201ENSMUST00000083906 133 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Rnu2-10-201ENSMUST00000084010 191 ntBASIC5.21□□□□□ -1.58
Msx1P13297 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Msx1P13297 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.21□□□□□ -1.58
Msx1P13297 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Msx1P13297 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Msx1P13297 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.21□□□□□ -1.58
Msx1P13297 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx1P13297 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.2□□□□□ -1.58
Msx1P13297 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Msx1P13297 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx1P13297 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx1P13297 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Msx1P13297 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.2□□□□□ -1.58
Msx1P13297 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm23593-201ENSMUST00000104309 120 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm13214-201ENSMUST00000122137 408 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Gm22277-201ENSMUST00000157204 277 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC5.2□□□□□ -1.58
Msx1P13297 Gm20526-201ENSMUST00000173416 158 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm23922-201ENSMUST00000178792 79 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm24657-201ENSMUST00000180085 79 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm22996-201ENSMUST00000180236 79 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm20203-201ENSMUST00000192352 332 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC5.2□□□□□ -1.58
Msx1P13297 Gm20368-201ENSMUST00000220716 301 ntBASIC5.2□□□□□ -1.58
Msx1P13297 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.2□□□□□ -1.58
Msx1P13297 CT025689.3-201ENSMUST00000223817 301 ntBASIC5.2□□□□□ -1.58
Msx1P13297 AC124581.4-201ENSMUST00000225874 463 ntBASIC5.2□□□□□ -1.58
Msx1P13297 AC164304.1-201ENSMUST00000226920 272 ntBASIC5.2□□□□□ -1.58
Msx1P13297 AC115735.2-201ENSMUST00000227135 351 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Msx1P13297 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC5.2□□□□□ -1.58
Msx1P13297 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx1P13297 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx1P13297 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Msx1P13297 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx1P13297 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Msx1P13297 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
Msx1P13297 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
Msx1P13297 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx1P13297 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx1P13297 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.19□□□□□ -1.58
Msx1P13297 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Msx1P13297 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx1P13297 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Msx1P13297 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Msx1P13297 Gm23839-201ENSMUST00000116957 109 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm11774-201ENSMUST00000118601 293 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm14810-201ENSMUST00000121628 486 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm22613-201ENSMUST00000122679 292 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm25291-201ENSMUST00000122795 144 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx1P13297 Gm25863-201ENSMUST00000158249 329 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm20651-201ENSMUST00000177219 329 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm20674-201ENSMUST00000177452 369 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Msx1P13297 Gm26337-201ENSMUST00000178000 79 ntBASIC5.19□□□□□ -1.58
Msx1P13297 Gm44520-201ENSMUST00000205447 802 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms