Protein–RNA interactions for Protein: B4E171

Tetraspanin, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4E171 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.87□□□□□ -1.31
B4E171 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
B4E171 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 RN7SKP55-201ENST00000364888 307 ntBASIC6.87□□□□□ -1.31
B4E171 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.87□□□□□ -1.31
B4E171 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 SNORA68-201ENST00000384437 133 ntBASIC6.87□□□□□ -1.31
B4E171 MIR99A-201ENST00000384906 81 ntBASIC6.87□□□□□ -1.31
B4E171 MIR187-201ENST00000385062 109 ntBASIC6.87□□□□□ -1.31
B4E171 RNA5SP280-201ENST00000411230 115 ntBASIC6.87□□□□□ -1.31
B4E171 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.87□□□□□ -1.31
B4E171 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.87□□□□□ -1.31
B4E171 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.87□□□□□ -1.31
B4E171 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 SNRPEP5-201ENST00000425442 278 ntBASIC6.87□□□□□ -1.31
B4E171 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
B4E171 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.87□□□□□ -1.31
B4E171 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.87□□□□□ -1.31
B4E171 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
B4E171 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.87□□□□□ -1.31
B4E171 AC063955.1-201ENST00000462872 685 ntBASIC6.87□□□□□ -1.31
B4E171 AL591122.1-201ENST00000487348 492 ntBASIC6.87□□□□□ -1.31
B4E171 SETP21-201ENST00000514799 892 ntBASIC6.87□□□□□ -1.31
B4E171 RNU6-751P-201ENST00000516382 101 ntBASIC6.87□□□□□ -1.31
B4E171 IGLVI-42-201ENST00000522485 381 ntBASIC6.87□□□□□ -1.31
B4E171 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.87□□□□□ -1.31
B4E171 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.87□□□□□ -1.31
B4E171 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.87□□□□□ -1.31
B4E171 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.87□□□□□ -1.31
B4E171 AL121809.2-201ENST00000613169 341 ntBASIC6.87□□□□□ -1.31
B4E171 AC010998.3-201ENST00000613871 631 ntBASIC6.87□□□□□ -1.31
B4E171 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.87□□□□□ -1.31
B4E171 AC140479.4-205ENST00000636339 820 ntBASIC6.87□□□□□ -1.31
B4E171 CASC19-208ENST00000641056 1292 ntBASIC6.87□□□□□ -1.31
B4E171 CASC19-227ENST00000641411 1285 ntBASIC6.87□□□□□ -1.31
B4E171 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.87□□□□□ -1.31
B4E171 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
B4E171 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC6.87□□□□□ -1.31
B4E171 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.87□□□□□ -1.31
B4E171 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
B4E171 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
B4E171 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
B4E171 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
B4E171 AL359263.1-201ENST00000441188 2796 ntBASIC6.86□□□□□ -1.31
B4E171 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.86□□□□□ -1.31
B4E171 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
B4E171 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
B4E171 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
B4E171 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
B4E171 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.86□□□□□ -1.31
B4E171 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
B4E171 VCAM1-204ENST00000370119 2483 ntTSL 2 BASIC6.86□□□□□ -1.31
B4E171 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
B4E171 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 MAPK10-270ENST00000641102 3538 ntBASIC6.86□□□□□ -1.31
B4E171 NACA-216ENST00000550952 2922 ntTSL 2 BASIC6.86□□□□□ -1.31
B4E171 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC6.86□□□□□ -1.31
B4E171 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 RN7SKP148-201ENST00000410179 275 ntBASIC6.86□□□□□ -1.31
B4E171 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.86□□□□□ -1.31
B4E171 RPL34P19-201ENST00000415903 342 ntBASIC6.86□□□□□ -1.31
B4E171 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.86□□□□□ -1.31
B4E171 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.86□□□□□ -1.31
B4E171 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.86□□□□□ -1.31
B4E171 FTLP17-201ENST00000432567 525 ntBASIC6.86□□□□□ -1.31
B4E171 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
B4E171 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.86□□□□□ -1.31
B4E171 AC123904.1-201ENST00000441072 368 ntBASIC6.86□□□□□ -1.31
B4E171 AC007919.2-201ENST00000444110 511 ntBASIC6.86□□□□□ -1.31
B4E171 AC114928.1-201ENST00000446516 415 ntBASIC6.86□□□□□ -1.31
B4E171 GOT2P2-201ENST00000450663 1251 ntBASIC6.86□□□□□ -1.31
B4E171 OR6C72P-201ENST00000451403 892 ntBASIC6.86□□□□□ -1.31
B4E171 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.86□□□□□ -1.31
B4E171 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 RPSAP7-201ENST00000456871 885 ntBASIC6.86□□□□□ -1.31
B4E171 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.86□□□□□ -1.31
B4E171 GAPDHP53-201ENST00000458397 924 ntBASIC6.86□□□□□ -1.31
B4E171 RN7SL372P-201ENST00000461982 298 ntBASIC6.86□□□□□ -1.31
B4E171 RN7SL790P-201ENST00000474043 298 ntBASIC6.86□□□□□ -1.31
B4E171 RPS26P24-201ENST00000497656 331 ntBASIC6.86□□□□□ -1.31
B4E171 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.86□□□□□ -1.31
B4E171 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.86□□□□□ -1.31
B4E171 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms