Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm25316-201ENSMUST00000116826 118 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm8475-201ENSMUST00000118211 526 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm12873-201ENSMUST00000119988 422 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm11414-201ENSMUST00000121795 263 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm13409-201ENSMUST00000122072 546 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm24418-201ENSMUST00000177597 79 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm24639-201ENSMUST00000178518 79 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm23076-201ENSMUST00000179082 79 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm25077-201ENSMUST00000179157 79 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm23963-201ENSMUST00000179603 77 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col17a1Q07563 Nras-ps2-201ENSMUST00000195269 178 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm44060-201ENSMUST00000204440 410 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm44519-201ENSMUST00000206486 122 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm18672-201ENSMUST00000208035 270 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.8□□□□□ -1.48
Col17a1Q07563 AC124356.2-201ENSMUST00000221874 336 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.8□□□□□ -1.48
Col17a1Q07563 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col17a1Q07563 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col17a1Q07563 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col17a1Q07563 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col17a1Q07563 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm5287-201ENSMUST00000120666 598 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm15157-201ENSMUST00000121852 702 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm14821-201ENSMUST00000121975 435 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm8338-201ENSMUST00000163928 363 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm23977-201ENSMUST00000177871 74 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Mir496b-201ENSMUST00000184935 113 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm43586-201ENSMUST00000195948 310 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC5.79□□□□□ -1.48
Col17a1Q07563 AC153924.1-201ENSMUST00000220117 312 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm4057-201ENSMUST00000221407 368 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC5.79□□□□□ -1.48
Col17a1Q07563 AC124729.1-201ENSMUST00000225327 976 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 AC102575.1-201ENSMUST00000225348 547 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col17a1Q07563 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm22364-201ENSMUST00000083097 98 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Mir202-201ENSMUST00000083568 72 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Snord15a-201ENSMUST00000083888 148 ntBASIC5.79□□□□□ -1.48
Col17a1Q07563 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col17a1Q07563 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Col17a1Q07563 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col17a1Q07563 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col17a1Q07563 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm12311-201ENSMUST00000118803 374 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm15141-201ENSMUST00000121860 729 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm26256-201ENSMUST00000122499 186 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm25294-201ENSMUST00000122791 104 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm24691-201ENSMUST00000157762 140 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm24417-201ENSMUST00000178123 79 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm24653-201ENSMUST00000178541 79 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm25934-201ENSMUST00000178642 79 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Mir7093-201ENSMUST00000184195 101 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm42924-201ENSMUST00000197261 185 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm5983-201ENSMUST00000197739 770 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Ighv1-68-201ENSMUST00000198789 294 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col17a1Q07563 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col17a1Q07563 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col17a1Q07563 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col17a1Q07563 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.78□□□□□ -1.48
Col17a1Q07563 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col17a1Q07563 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC5.77□□□□□ -1.48
Col17a1Q07563 Gm13340-201ENSMUST00000117219 1545 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm15108-201ENSMUST00000116160 803 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm11576-201ENSMUST00000117433 417 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm13581-201ENSMUST00000120675 278 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm25979-201ENSMUST00000157177 138 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm25559-201ENSMUST00000157182 74 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm23229-201ENSMUST00000157297 105 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm22621-201ENSMUST00000179678 74 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm29484-201ENSMUST00000186067 324 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm43214-201ENSMUST00000199242 352 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm44818-201ENSMUST00000206608 358 ntBASIC5.77□□□□□ -1.49
Col17a1Q07563 Gm44964-201ENSMUST00000207011 273 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms