Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcf1Q9QZM3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clcf1Q9QZM3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clcf1Q9QZM3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Fst-202ENSMUST00000223640 2612 ntBASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clcf1Q9QZM3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Gm3375-201ENSMUST00000203929 796 ntBASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clcf1Q9QZM3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Clcf1Q9QZM3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Gm10418-201ENSMUST00000100943 576 ntBASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Gm13836-201ENSMUST00000121159 501 ntBASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clcf1Q9QZM3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Clcf1Q9QZM3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms