Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.92■□□□□ 0.62
Copb1Q9JIF7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Copb1Q9JIF7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Copb1Q9JIF7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Gm11249-201ENSMUST00000117071 859 ntBASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Copb1Q9JIF7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Copb1Q9JIF7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
Copb1Q9JIF7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Copb1Q9JIF7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Gm12896-201ENSMUST00000118430 226 ntBASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Copb1Q9JIF7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Copb1Q9JIF7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.88■□□□□ 0.61
Copb1Q9JIF7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.87■□□□□ 0.61
Copb1Q9JIF7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Copb1Q9JIF7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.85■□□□□ 0.61
Copb1Q9JIF7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms