Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd1lQ9CXF7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd1lQ9CXF7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd1lQ9CXF7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chd1lQ9CXF7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Chd1lQ9CXF7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chd1lQ9CXF7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chd1lQ9CXF7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Chd1lQ9CXF7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd1lQ9CXF7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd1lQ9CXF7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
Chd1lQ9CXF7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd1lQ9CXF7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chd1lQ9CXF7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.51■□□□□ 0.71
Chd1lQ9CXF7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Chd1lQ9CXF7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Chd1lQ9CXF7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms