Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smc3Q9CW03 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.31■□□□□ 0.84
Smc3Q9CW03 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Smc3Q9CW03 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Dio3-201ENSMUST00000097228 1449 ntBASIC20.3■□□□□ 0.84
Smc3Q9CW03 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Gm15375-201ENSMUST00000119510 849 ntBASIC20.3■□□□□ 0.84
Smc3Q9CW03 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smc3Q9CW03 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smc3Q9CW03 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smc3Q9CW03 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.28■□□□□ 0.84
Smc3Q9CW03 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smc3Q9CW03 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Smc3Q9CW03 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.27■□□□□ 0.84
Smc3Q9CW03 Gm12896-201ENSMUST00000118430 226 ntBASIC20.27■□□□□ 0.84
Smc3Q9CW03 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc3Q9CW03 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Smc3Q9CW03 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Smc3Q9CW03 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.27■□□□□ 0.83
Smc3Q9CW03 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc3Q9CW03 Gm6576-201ENSMUST00000169678 883 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms