Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Sec61bQ9CQS8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Tgds-204ENSMUST00000228543 1594 ntBASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Gm28196-201ENSMUST00000187719 640 ntBASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Sec61bQ9CQS8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gm9013-201ENSMUST00000132939 882 ntBASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gm6345-202ENSMUST00000180900 204 ntBASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gm38308-201ENSMUST00000194934 1809 ntBASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sec61bQ9CQS8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61bQ9CQS8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms