Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clp1Q99LI9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clp1Q99LI9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clp1Q99LI9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clp1Q99LI9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clp1Q99LI9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clp1Q99LI9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Gm43347-201ENSMUST00000200226 580 ntBASIC18.19■□□□□ 0.5
Clp1Q99LI9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Clp1Q99LI9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.18■□□□□ 0.5
Clp1Q99LI9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.18■□□□□ 0.5
Clp1Q99LI9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clp1Q99LI9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clp1Q99LI9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Gm11336-201ENSMUST00000118168 334 ntBASIC18.16■□□□□ 0.5
Clp1Q99LI9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.16■□□□□ 0.5
Clp1Q99LI9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clp1Q99LI9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Fst-202ENSMUST00000223640 2612 ntBASIC18.15■□□□□ 0.5
Clp1Q99LI9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.15■□□□□ 0.5
Clp1Q99LI9 AW822252-206ENSMUST00000208904 237 ntBASIC18.15■□□□□ 0.5
Clp1Q99LI9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Clp1Q99LI9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms