Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Col20a1Q923P0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.39■□□□□ 0.85
Col20a1Q923P0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col20a1Q923P0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.38■□□□□ 0.85
Col20a1Q923P0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Actl10-202ENSMUST00000226583 1501 ntBASIC20.38■□□□□ 0.85
Col20a1Q923P0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col20a1Q923P0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Gm26039-201ENSMUST00000158152 144 ntBASIC20.37■□□□□ 0.85
Col20a1Q923P0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col20a1Q923P0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Gm11355-201ENSMUST00000121120 306 ntBASIC20.36■□□□□ 0.85
Col20a1Q923P0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.36■□□□□ 0.85
Col20a1Q923P0 Gm10566-201ENSMUST00000086739 996 ntBASIC20.36■□□□□ 0.85
Col20a1Q923P0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col20a1Q923P0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col20a1Q923P0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.34■□□□□ 0.85
Col20a1Q923P0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col20a1Q923P0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.33■□□□□ 0.85
Col20a1Q923P0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col20a1Q923P0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col20a1Q923P0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.33■□□□□ 0.84
Col20a1Q923P0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms