Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdhb1Q91Y08 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb1Q91Y08 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb1Q91Y08 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdhb1Q91Y08 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Mir1199-201ENSMUST00000117015 119 ntBASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb1Q91Y08 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb1Q91Y08 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.89■□□□□ 0.46
Pcdhb1Q91Y08 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb1Q91Y08 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Gm37025-201ENSMUST00000195159 829 ntBASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb1Q91Y08 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb1Q91Y08 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms