Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb3Q91XZ7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb3Q91XZ7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Gm6420-201ENSMUST00000193885 723 ntBASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb3Q91XZ7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb3Q91XZ7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb3Q91XZ7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb3Q91XZ7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb3Q91XZ7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdhb3Q91XZ7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms