Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Gm10493-201ENSMUST00000097270 612 ntBASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rab40bQ8VHP8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rab40bQ8VHP8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rab40bQ8VHP8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Rab40bQ8VHP8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Mir2861-201ENSMUST00000175539 82 ntBASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rab40bQ8VHP8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Gm13401-201ENSMUST00000117074 291 ntBASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rab40bQ8VHP8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms