Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.71■□□□□ 0.59
Trim68Q8K243 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.71■□□□□ 0.59
Trim68Q8K243 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim68Q8K243 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.71■□□□□ 0.58
Trim68Q8K243 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.7■□□□□ 0.58
Trim68Q8K243 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Mir2861-201ENSMUST00000175539 82 ntBASIC18.7■□□□□ 0.58
Trim68Q8K243 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.7■□□□□ 0.58
Trim68Q8K243 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim68Q8K243 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim68Q8K243 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim68Q8K243 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim68Q8K243 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim68Q8K243 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trim68Q8K243 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim68Q8K243 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim68Q8K243 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim68Q8K243 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Trim68Q8K243 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim68Q8K243 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trim68Q8K243 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim68Q8K243 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.68■□□□□ 0.58
Trim68Q8K243 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Gm25016-201ENSMUST00000158399 131 ntBASIC18.68■□□□□ 0.58
Trim68Q8K243 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.68■□□□□ 0.58
Trim68Q8K243 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.68■□□□□ 0.58
Trim68Q8K243 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.68■□□□□ 0.58
Trim68Q8K243 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trim68Q8K243 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trim68Q8K243 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.67■□□□□ 0.58
Trim68Q8K243 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim68Q8K243 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.67■□□□□ 0.58
Trim68Q8K243 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trim68Q8K243 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim68Q8K243 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Trim68Q8K243 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.66■□□□□ 0.58
Trim68Q8K243 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trim68Q8K243 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.66■□□□□ 0.58
Trim68Q8K243 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Trim68Q8K243 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.66■□□□□ 0.58
Trim68Q8K243 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trim68Q8K243 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trim68Q8K243 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Trim68Q8K243 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.65■□□□□ 0.58
Trim68Q8K243 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms