Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb7Q8CDY9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Gm15375-201ENSMUST00000119510 849 ntBASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb7Q8CDY9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb7Q8CDY9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb7Q8CDY9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb7Q8CDY9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Gm12527-201ENSMUST00000117967 564 ntBASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb7Q8CDY9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb7Q8CDY9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb7Q8CDY9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb7Q8CDY9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb7Q8CDY9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms