Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.54■□□□□ 0.4
Sfr1Q8BP27 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Gm8969-201ENSMUST00000199694 526 ntBASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Gm21814-202ENSMUST00000203277 873 ntBASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sfr1Q8BP27 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Gm37055-201ENSMUST00000191866 133 ntBASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sfr1Q8BP27 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.52■□□□□ 0.39
Sfr1Q8BP27 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sfr1Q8BP27 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Gm12085-201ENSMUST00000119263 940 ntBASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Gm24841-201ENSMUST00000158676 357 ntBASIC17.51■□□□□ 0.39
Sfr1Q8BP27 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sfr1Q8BP27 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sfr1Q8BP27 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.49■□□□□ 0.39
Sfr1Q8BP27 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms