Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC22.68■■□□□ 1.22
Col16a1Q8BLX7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Gm11336-201ENSMUST00000118168 334 ntBASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Gm9449-201ENSMUST00000207265 1011 ntBASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Col16a1Q8BLX7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Gm5828-201ENSMUST00000071842 1860 ntBASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Phf7-203ENSMUST00000226565 1971 ntBASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col16a1Q8BLX7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Gm6190-201ENSMUST00000220683 1374 ntBASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 AC132104.2-201ENSMUST00000215011 266 ntBASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col16a1Q8BLX7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Gm10052-201ENSMUST00000168019 960 ntBASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Gm37935-201ENSMUST00000192012 982 ntBASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Gm44450-201ENSMUST00000199528 114 ntBASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Gm7729-201ENSMUST00000050143 801 ntBASIC22.64■■□□□ 1.22
Col16a1Q8BLX7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col16a1Q8BLX7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col16a1Q8BLX7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col16a1Q8BLX7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col16a1Q8BLX7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Col16a1Q8BLX7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col16a1Q8BLX7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 Gm18206-201ENSMUST00000207027 926 ntBASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 AC161829.1-201ENSMUST00000220298 281 ntBASIC22.63■■□□□ 1.21
Col16a1Q8BLX7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Gm43073-201ENSMUST00000198200 1189 ntBASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Rps4l-201ENSMUST00000071745 943 ntBASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Col16a1Q8BLX7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Col16a1Q8BLX7 Gm2651-201ENSMUST00000203560 838 ntBASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms