Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atpaf1Q811I0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atpaf1Q811I0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atpaf1Q811I0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atpaf1Q811I0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atpaf1Q811I0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Atpaf1Q811I0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Atpaf1Q811I0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Atpaf1Q811I0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Atpaf1Q811I0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.1□□□□□ -0.15
Atpaf1Q811I0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.1□□□□□ -0.15
Atpaf1Q811I0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atpaf1Q811I0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms