Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rnf220Q6PDX6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Gm43060-201ENSMUST00000200621 289 ntBASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rnf220Q6PDX6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rnf220Q6PDX6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf220Q6PDX6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms