Protein–RNA interactions for Protein: Q6P9K8

Caskin1, Caskin-1, mousemouse

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Caskin1Q6P9K8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Caskin1Q6P9K8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC25.3■■□□□ 1.64
Caskin1Q6P9K8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC25.3■■□□□ 1.64
Caskin1Q6P9K8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 AW822252-206ENSMUST00000208904 237 ntBASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Caskin1Q6P9K8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Caskin1Q6P9K8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
Caskin1Q6P9K8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Caskin1Q6P9K8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Caskin1Q6P9K8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Caskin1Q6P9K8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC25.28■■□□□ 1.64
Caskin1Q6P9K8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Caskin1Q6P9K8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Gm43514-201ENSMUST00000198852 424 ntBASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC25.27■■□□□ 1.64
Caskin1Q6P9K8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Gm5864-201ENSMUST00000202263 970 ntBASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Caskin1Q6P9K8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Caskin1Q6P9K8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Gm5828-201ENSMUST00000071842 1860 ntBASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Caskin1Q6P9K8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
Caskin1Q6P9K8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Caskin1Q6P9K8 Gm13312-201ENSMUST00000119631 718 ntBASIC25.21■■□□□ 1.63
Caskin1Q6P9K8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Caskin1Q6P9K8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Caskin1Q6P9K8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Caskin1Q6P9K8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Caskin1Q6P9K8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Caskin1Q6P9K8 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Caskin1Q6P9K8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Caskin1Q6P9K8 AC153794.1-201ENSMUST00000169148 126 ntBASIC25.2■■□□□ 1.63
Caskin1Q6P9K8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms