Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.82□□□□□ -0.04
Vamp1Q62442 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.82□□□□□ -0.04
Vamp1Q62442 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.82□□□□□ -0.04
Vamp1Q62442 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vamp1Q62442 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.82□□□□□ -0.04
Vamp1Q62442 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.81□□□□□ -0.04
Vamp1Q62442 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vamp1Q62442 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Vamp1Q62442 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vamp1Q62442 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.81□□□□□ -0.04
Vamp1Q62442 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vamp1Q62442 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.8□□□□□ -0.04
Vamp1Q62442 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Vamp1Q62442 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vamp1Q62442 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.8□□□□□ -0.04
Vamp1Q62442 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp1Q62442 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp1Q62442 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp1Q62442 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp1Q62442 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp1Q62442 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp1Q62442 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Vamp1Q62442 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vamp1Q62442 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.78□□□□□ -0.04
Vamp1Q62442 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vamp1Q62442 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vamp1Q62442 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vamp1Q62442 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vamp1Q62442 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vamp1Q62442 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Vamp1Q62442 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vamp1Q62442 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
Vamp1Q62442 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms