Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Reep4-203ENSMUST00000226563 1444 ntBASIC12.55□□□□□ -0.4
Ndufa4Q62425 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.55□□□□□ -0.4
Ndufa4Q62425 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Gm6139-201ENSMUST00000079261 882 ntBASIC12.55□□□□□ -0.4
Ndufa4Q62425 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.55□□□□□ -0.4
Ndufa4Q62425 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ndufa4Q62425 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Gm10418-201ENSMUST00000100943 576 ntBASIC12.54□□□□□ -0.4
Ndufa4Q62425 Gm12821-201ENSMUST00000120022 600 ntBASIC12.54□□□□□ -0.4
Ndufa4Q62425 Gm21956-201ENSMUST00000179946 522 ntBASIC12.54□□□□□ -0.4
Ndufa4Q62425 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ndufa4Q62425 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.53□□□□□ -0.4
Ndufa4Q62425 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.53□□□□□ -0.4
Ndufa4Q62425 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.53□□□□□ -0.4
Ndufa4Q62425 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ndufa4Q62425 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.52□□□□□ -0.4
Ndufa4Q62425 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.52□□□□□ -0.4
Ndufa4Q62425 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufa4Q62425 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufa4Q62425 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufa4Q62425 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ndufa4Q62425 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.52□□□□□ -0.41
Ndufa4Q62425 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ndufa4Q62425 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms