Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Gm12644-201ENSMUST00000119935 606 ntBASIC16.24■□□□□ 0.19
VcanQ62059 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VcanQ62059 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.24■□□□□ 0.19
VcanQ62059 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
VcanQ62059 Gm9727-201ENSMUST00000161387 555 ntBASIC16.24■□□□□ 0.19
VcanQ62059 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.24■□□□□ 0.19
VcanQ62059 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.24■□□□□ 0.19
VcanQ62059 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VcanQ62059 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VcanQ62059 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.23■□□□□ 0.19
VcanQ62059 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.23■□□□□ 0.19
VcanQ62059 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.23■□□□□ 0.19
VcanQ62059 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VcanQ62059 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VcanQ62059 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.23■□□□□ 0.19
VcanQ62059 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.23■□□□□ 0.19
VcanQ62059 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VcanQ62059 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.23■□□□□ 0.19
VcanQ62059 Gm27397-201ENSMUST00000184997 107 ntBASIC16.23■□□□□ 0.19
VcanQ62059 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.23■□□□□ 0.19
VcanQ62059 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VcanQ62059 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VcanQ62059 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.22■□□□□ 0.19
VcanQ62059 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
VcanQ62059 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VcanQ62059 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VcanQ62059 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
VcanQ62059 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.21■□□□□ 0.19
VcanQ62059 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VcanQ62059 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.21■□□□□ 0.19
VcanQ62059 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VcanQ62059 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
VcanQ62059 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VcanQ62059 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VcanQ62059 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.21■□□□□ 0.18
VcanQ62059 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VcanQ62059 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
VcanQ62059 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VcanQ62059 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
VcanQ62059 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VcanQ62059 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.2■□□□□ 0.18
VcanQ62059 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
VcanQ62059 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VcanQ62059 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.2■□□□□ 0.18
VcanQ62059 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VcanQ62059 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VcanQ62059 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VcanQ62059 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
VcanQ62059 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VcanQ62059 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.19■□□□□ 0.18
VcanQ62059 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VcanQ62059 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VcanQ62059 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VcanQ62059 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.19■□□□□ 0.18
VcanQ62059 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VcanQ62059 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms