Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nr1h4Q60641 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.49■□□□□ 0.23
Nr1h4Q60641 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nr1h4Q60641 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.47■□□□□ 0.23
Nr1h4Q60641 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h4Q60641 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Gm7291-201ENSMUST00000199147 382 ntBASIC16.46■□□□□ 0.23
Nr1h4Q60641 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.46■□□□□ 0.23
Nr1h4Q60641 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Nr1h4Q60641 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Flg-201ENSMUST00000050758 1488 ntBASIC16.45■□□□□ 0.22
Nr1h4Q60641 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nr1h4Q60641 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Nr1h4Q60641 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Gm6211-202ENSMUST00000167849 925 ntBASIC16.44■□□□□ 0.22
Nr1h4Q60641 Gm44549-201ENSMUST00000208351 577 ntBASIC16.44■□□□□ 0.22
Nr1h4Q60641 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Gm5874-201ENSMUST00000096101 508 ntBASIC16.44■□□□□ 0.22
Nr1h4Q60641 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nr1h4Q60641 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms