Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Gm30025-201ENSMUST00000218555 728 ntBASIC16.51■□□□□ 0.23
Xrcc1Q60596 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.51■□□□□ 0.23
Xrcc1Q60596 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Xrcc1Q60596 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Xrcc1Q60596 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.5■□□□□ 0.23
Xrcc1Q60596 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.49■□□□□ 0.23
Xrcc1Q60596 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Gm7638-201ENSMUST00000121348 967 ntBASIC16.49■□□□□ 0.23
Xrcc1Q60596 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Gm8969-201ENSMUST00000199694 526 ntBASIC16.49■□□□□ 0.23
Xrcc1Q60596 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Xrcc1Q60596 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Xrcc1Q60596 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Xrcc1Q60596 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.48■□□□□ 0.23
Xrcc1Q60596 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.48■□□□□ 0.23
Xrcc1Q60596 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Xrcc1Q60596 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Xrcc1Q60596 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Xrcc1Q60596 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.48■□□□□ 0.23
Xrcc1Q60596 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.48■□□□□ 0.23
Xrcc1Q60596 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Xrcc1Q60596 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.47■□□□□ 0.23
Xrcc1Q60596 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.47■□□□□ 0.23
Xrcc1Q60596 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Xrcc1Q60596 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Xrcc1Q60596 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Xrcc1Q60596 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.46■□□□□ 0.23
Xrcc1Q60596 Gm37025-201ENSMUST00000195159 829 ntBASIC16.46■□□□□ 0.23
Xrcc1Q60596 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.46■□□□□ 0.23
Xrcc1Q60596 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Xrcc1Q60596 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
Xrcc1Q60596 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Xrcc1Q60596 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrcc1Q60596 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms