Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Znf48Q3US17 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Znf48Q3US17 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Gm11927-201ENSMUST00000118472 759 ntBASIC14.24□□□□□ -0.13
Znf48Q3US17 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.24□□□□□ -0.13
Znf48Q3US17 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.24□□□□□ -0.13
Znf48Q3US17 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.24□□□□□ -0.13
Znf48Q3US17 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Znf48Q3US17 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Flg-201ENSMUST00000050758 1488 ntBASIC14.23□□□□□ -0.13
Znf48Q3US17 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Znf48Q3US17 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Znf48Q3US17 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Znf48Q3US17 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.22□□□□□ -0.13
Znf48Q3US17 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.22□□□□□ -0.13
Znf48Q3US17 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.22□□□□□ -0.13
Znf48Q3US17 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.22□□□□□ -0.13
Znf48Q3US17 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.22□□□□□ -0.13
Znf48Q3US17 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Znf48Q3US17 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.22□□□□□ -0.13
Znf48Q3US17 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Znf48Q3US17 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Znf48Q3US17 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.21□□□□□ -0.13
Znf48Q3US17 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Znf48Q3US17 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms