Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.42■□□□□ 0.54
Nhej1Q3KNJ2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Gm10138-203ENSMUST00000206952 366 ntBASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nhej1Q3KNJ2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Nhej1Q3KNJ2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nhej1Q3KNJ2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Gm8495-201ENSMUST00000188740 694 ntBASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nhej1Q3KNJ2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Gm27405-201ENSMUST00000184201 112 ntBASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nhej1Q3KNJ2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nhej1Q3KNJ2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms