Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Gm6007-201ENSMUST00000208170 823 ntBASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Ush2AQ2QI47 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC9.25□□□□□ -0.93
Ush2AQ2QI47 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 AC131187.1-201ENSMUST00000224567 809 ntBASIC9.24□□□□□ -0.93
Ush2AQ2QI47 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Gm18187-201ENSMUST00000196476 984 ntBASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Rbfox2-207ENSMUST00000227533 1041 ntBASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Ush2AQ2QI47 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Ush2AQ2QI47 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Ush2AQ2QI47 Gm5312-201ENSMUST00000203728 547 ntBASIC9.22□□□□□ -0.93
Ush2AQ2QI47 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.22□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms