Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Rab4aP56371 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.67□□□□□ -0.22
Rab4aP56371 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rab4aP56371 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rab4aP56371 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rab4aP56371 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.66□□□□□ -0.22
Rab4aP56371 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rab4aP56371 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rab4aP56371 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rab4aP56371 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.66□□□□□ -0.22
Rab4aP56371 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rab4aP56371 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rab4aP56371 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab4aP56371 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rab4aP56371 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab4aP56371 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab4aP56371 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC13.65□□□□□ -0.22
Rab4aP56371 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rab4aP56371 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Rab4aP56371 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Rab4aP56371 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rab4aP56371 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Rab4aP56371 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rab4aP56371 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rab4aP56371 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rab4aP56371 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rab4aP56371 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rab4aP56371 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.64□□□□□ -0.23
Rab4aP56371 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.64□□□□□ -0.23
Rab4aP56371 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.64□□□□□ -0.23
Rab4aP56371 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms