Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.62■□□□□ 0.09
Rfx3P48381 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rfx3P48381 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.62■□□□□ 0.09
Rfx3P48381 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.62■□□□□ 0.09
Rfx3P48381 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rfx3P48381 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.61■□□□□ 0.09
Rfx3P48381 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfx3P48381 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rfx3P48381 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.61■□□□□ 0.09
Rfx3P48381 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rfx3P48381 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.61■□□□□ 0.09
Rfx3P48381 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.6■□□□□ 0.09
Rfx3P48381 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Idnk-204ENSMUST00000226010 1898 ntBASIC15.6■□□□□ 0.09
Rfx3P48381 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rfx3P48381 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.59■□□□□ 0.09
Rfx3P48381 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Rfx3P48381 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.59■□□□□ 0.09
Rfx3P48381 Gm4968-201ENSMUST00000071458 858 ntBASIC15.59■□□□□ 0.09
Rfx3P48381 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rfx3P48381 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rfx3P48381 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rfx3P48381 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.59■□□□□ 0.09
Rfx3P48381 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rfx3P48381 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rfx3P48381 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rfx3P48381 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfx3P48381 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.58■□□□□ 0.08
Rfx3P48381 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfx3P48381 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfx3P48381 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rfx3P48381 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.58■□□□□ 0.08
Rfx3P48381 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.58■□□□□ 0.08
Rfx3P48381 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rfx3P48381 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rfx3P48381 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Gm10418-201ENSMUST00000100943 576 ntBASIC15.57■□□□□ 0.08
Rfx3P48381 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rfx3P48381 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfx3P48381 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfx3P48381 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rfx3P48381 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rfx3P48381 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfx3P48381 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rfx3P48381 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rfx3P48381 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfx3P48381 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms