Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.49□□□□□ -0.09
Ercc1P07903 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.49□□□□□ -0.09
Ercc1P07903 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.49□□□□□ -0.09
Ercc1P07903 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ercc1P07903 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ercc1P07903 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ercc1P07903 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
Ercc1P07903 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ercc1P07903 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Gm15039-201ENSMUST00000118914 875 ntBASIC14.48□□□□□ -0.09
Ercc1P07903 Gm18671-201ENSMUST00000214826 683 ntBASIC14.48□□□□□ -0.09
Ercc1P07903 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.48□□□□□ -0.09
Ercc1P07903 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Ercc1P07903 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ercc1P07903 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ercc1P07903 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.47□□□□□ -0.09
Ercc1P07903 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Ercc1P07903 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Gm13146-201ENSMUST00000118508 780 ntBASIC14.47□□□□□ -0.09
Ercc1P07903 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.47□□□□□ -0.09
Ercc1P07903 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.47□□□□□ -0.09
Ercc1P07903 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.47□□□□□ -0.09
Ercc1P07903 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.47□□□□□ -0.09
Ercc1P07903 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ercc1P07903 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ercc1P07903 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ercc1P07903 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ercc1P07903 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Ercc1P07903 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ercc1P07903 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.46□□□□□ -0.09
Ercc1P07903 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ercc1P07903 Gm13534-201ENSMUST00000121169 513 ntBASIC14.46□□□□□ -0.09
Ercc1P07903 Gm5874-201ENSMUST00000096101 508 ntBASIC14.46□□□□□ -0.09
Ercc1P07903 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ercc1P07903 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc1P07903 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.46□□□□□ -0.1
Ercc1P07903 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc1P07903 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ercc1P07903 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc1P07903 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ercc1P07903 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc1P07903 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc1P07903 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc1P07903 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc1P07903 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ercc1P07903 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms