Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04944 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
P04944 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.4□□□□□ -0.26
P04944 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.4□□□□□ -0.26
P04944 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.4□□□□□ -0.26
P04944 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.4□□□□□ -0.26
P04944 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04944 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
P04944 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
P04944 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.39□□□□□ -0.27
P04944 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
P04944 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P04944 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.39□□□□□ -0.27
P04944 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.39□□□□□ -0.27
P04944 Gm10517-202ENSMUST00000192970 758 ntBASIC13.39□□□□□ -0.27
P04944 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.39□□□□□ -0.27
P04944 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.39□□□□□ -0.27
P04944 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P04944 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
P04944 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.39□□□□□ -0.27
P04944 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04944 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.38□□□□□ -0.27
P04944 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
P04944 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Gm13216-201ENSMUST00000117145 591 ntBASIC13.38□□□□□ -0.27
P04944 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.38□□□□□ -0.27
P04944 Gm24841-201ENSMUST00000158676 357 ntBASIC13.38□□□□□ -0.27
P04944 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.38□□□□□ -0.27
P04944 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Gm37856-201ENSMUST00000191634 999 ntBASIC13.38□□□□□ -0.27
P04944 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
P04944 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
P04944 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.38□□□□□ -0.27
P04944 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.38□□□□□ -0.27
P04944 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Haglr-201ENSMUST00000100000 2085 ntBASIC13.38□□□□□ -0.27
P04944 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.38□□□□□ -0.27
P04944 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
P04944 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
P04944 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.37□□□□□ -0.27
P04944 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.37□□□□□ -0.27
P04944 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.37□□□□□ -0.27
P04944 Gm12527-201ENSMUST00000117967 564 ntBASIC13.37□□□□□ -0.27
P04944 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
P04944 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.37□□□□□ -0.27
P04944 Trmt13-210ENSMUST00000198454 880 ntBASIC13.37□□□□□ -0.27
P04944 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
P04944 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
P04944 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
P04944 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms