Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cd74P04441 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cd74P04441 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd74P04441 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd74P04441 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cd74P04441 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd74P04441 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd74P04441 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd74P04441 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cd74P04441 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cd74P04441 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd74P04441 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cd74P04441 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.52□□□□□ -0.09
Cd74P04441 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd74P04441 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cd74P04441 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd74P04441 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cd74P04441 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.51□□□□□ -0.09
Cd74P04441 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.51□□□□□ -0.09
Cd74P04441 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cd74P04441 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cd74P04441 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd74P04441 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cd74P04441 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Gm10698-201ENSMUST00000182663 604 ntBASIC14.5□□□□□ -0.09
Cd74P04441 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.5□□□□□ -0.09
Cd74P04441 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.5□□□□□ -0.09
Cd74P04441 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.5□□□□□ -0.09
Cd74P04441 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Zfp783-201ENSMUST00000095946 670 ntBASIC14.5□□□□□ -0.09
Cd74P04441 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cd74P04441 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cd74P04441 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.5□□□□□ -0.09
Cd74P04441 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cd74P04441 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Cd74P04441 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cd74P04441 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cd74P04441 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Cd74P04441 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Mir1199-201ENSMUST00000117015 119 ntBASIC14.49□□□□□ -0.09
Cd74P04441 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.49□□□□□ -0.09
Cd74P04441 Gm10138-203ENSMUST00000206952 366 ntBASIC14.49□□□□□ -0.09
Cd74P04441 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cd74P04441 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.49□□□□□ -0.09
Cd74P04441 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cd74P04441 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cd74P04441 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cd74P04441 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Cd74P04441 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.48□□□□□ -0.09
Cd74P04441 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cd74P04441 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.48□□□□□ -0.09
Cd74P04441 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cd74P04441 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cd74P04441 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms