Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Pdlim1O70400 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Pdlim1O70400 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pdlim1O70400 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim1O70400 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim1O70400 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim1O70400 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim1O70400 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim1O70400 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim1O70400 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim1O70400 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Pdlim1O70400 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pdlim1O70400 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pdlim1O70400 Mir6982-201ENSMUST00000184354 68 ntBASIC17.02■□□□□ 0.32
Pdlim1O70400 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.02■□□□□ 0.32
Pdlim1O70400 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Pdlim1O70400 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim1O70400 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pdlim1O70400 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pdlim1O70400 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Pdlim1O70400 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.01■□□□□ 0.31
Pdlim1O70400 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.01■□□□□ 0.31
Pdlim1O70400 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pdlim1O70400 Gm7791-201ENSMUST00000219066 539 ntBASIC17.01■□□□□ 0.31
Pdlim1O70400 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pdlim1O70400 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim1O70400 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pdlim1O70400 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pdlim1O70400 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pdlim1O70400 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pdlim1O70400 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pdlim1O70400 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Pdlim1O70400 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Gm43353-201ENSMUST00000199224 1295 ntBASIC17■□□□□ 0.31
Pdlim1O70400 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Gm43808-201ENSMUST00000202534 2065 ntBASIC17■□□□□ 0.31
Pdlim1O70400 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim1O70400 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Pdlim1O70400 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Pdlim1O70400 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim1O70400 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pdlim1O70400 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
Pdlim1O70400 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pdlim1O70400 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Pdlim1O70400 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.98■□□□□ 0.31
Pdlim1O70400 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim1O70400 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms