Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.23■□□□□ 0.19
Abca4O35600 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Abca4O35600 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.22■□□□□ 0.19
Abca4O35600 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Mir3113-201ENSMUST00000175478 76 ntBASIC16.22■□□□□ 0.19
Abca4O35600 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.22■□□□□ 0.19
Abca4O35600 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.22■□□□□ 0.19
Abca4O35600 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.22■□□□□ 0.19
Abca4O35600 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.22■□□□□ 0.19
Abca4O35600 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.22■□□□□ 0.19
Abca4O35600 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.22■□□□□ 0.19
Abca4O35600 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Abca4O35600 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Abca4O35600 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca4O35600 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Abca4O35600 AA543401-201ENSMUST00000164248 1269 ntBASIC16.21■□□□□ 0.19
Abca4O35600 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca4O35600 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca4O35600 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Abca4O35600 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca4O35600 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Abca4O35600 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Abca4O35600 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Abca4O35600 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.2■□□□□ 0.18
Abca4O35600 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Abca4O35600 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Abca4O35600 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.2■□□□□ 0.18
Abca4O35600 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Abca4O35600 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.19■□□□□ 0.18
Abca4O35600 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Abca4O35600 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.19■□□□□ 0.18
Abca4O35600 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Abca4O35600 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Abca4O35600 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
Abca4O35600 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Abca4O35600 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Gm6550-201ENSMUST00000187574 993 ntBASIC16.19■□□□□ 0.18
Abca4O35600 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.19■□□□□ 0.18
Abca4O35600 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Abca4O35600 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Abca4O35600 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.18■□□□□ 0.18
Abca4O35600 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.18■□□□□ 0.18
Abca4O35600 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Abca4O35600 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Abca4O35600 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Abca4O35600 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Abca4O35600 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.18■□□□□ 0.18
Abca4O35600 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Abca4O35600 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.18■□□□□ 0.18
Abca4O35600 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Abca4O35600 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Abca4O35600 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Abca4O35600 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms